package bistro
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bistro.bioinfo
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bistro.ppx
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bistro.utils
Legend:
Library
Module
Module type
Parameter
Class
Class type
Library
Module
Module type
Parameter
Class
Class type
val run :
?prefix:string ->
?addgenes:bool ->
?locustag:string ->
?increment:int ->
?gffver:string ->
?compliant:bool ->
?centre:string ->
?genus:string ->
?species:string ->
?strain:string ->
?plasmid:string ->
?kingdom:string ->
?gcode:int ->
?gram:[ `Plus | `Minus ] ->
?usegenus:bool ->
?proteins:string ->
?hmms:string ->
?metagenome:bool ->
?rawproduct:bool ->
?fast:bool ->
?threads:int ->
?mincontiglen:int ->
?evalue:float ->
?rfam:bool ->
?norrna:bool ->
?notrna:bool ->
?rnammer:bool ->
Defs.fasta Bistro.Std.workflow ->
[ `prokka ] Bistro.Std.directory Bistro.Std.workflow