bio_io 0.6.0 · OCaml Package

val names : Base.string Base.list

val tlen : (t, Base.int Base.option) Fieldslib.Field.t

val qlen : (t, Base.int Base.option) Fieldslib.Field.t

val bits : (t, Base.float) Fieldslib.Field.t

val evalue : (t, Base.float) Fieldslib.Field.t

val tend : (t, Base.int) Fieldslib.Field.t

val tstart : (t, Base.int) Fieldslib.Field.t

val qend : (t, Base.int) Fieldslib.Field.t

val qstart : (t, Base.int) Fieldslib.Field.t

val gapopen : (t, Base.int) Fieldslib.Field.t

val mismatch : (t, Base.int) Fieldslib.Field.t

val alnlen : (t, Base.int) Fieldslib.Field.t

val pident : (t, Base.float) Fieldslib.Field.t

val target : (t, Base.string) Fieldslib.Field.t

val query : (t, Base.string) Fieldslib.Field.t

val fold : 
  init:'acc__0 ->
  query:('acc__0 -> (t, Base.string) Fieldslib.Field.t -> 'acc__1) ->
  target:('acc__1 -> (t, Base.string) Fieldslib.Field.t -> 'acc__2) ->
  pident:('acc__2 -> (t, Base.float) Fieldslib.Field.t -> 'acc__3) ->
  alnlen:('acc__3 -> (t, Base.int) Fieldslib.Field.t -> 'acc__4) ->
  mismatch:('acc__4 -> (t, Base.int) Fieldslib.Field.t -> 'acc__5) ->
  gapopen:('acc__5 -> (t, Base.int) Fieldslib.Field.t -> 'acc__6) ->
  qstart:('acc__6 -> (t, Base.int) Fieldslib.Field.t -> 'acc__7) ->
  qend:('acc__7 -> (t, Base.int) Fieldslib.Field.t -> 'acc__8) ->
  tstart:('acc__8 -> (t, Base.int) Fieldslib.Field.t -> 'acc__9) ->
  tend:('acc__9 -> (t, Base.int) Fieldslib.Field.t -> 'acc__10) ->
  evalue:('acc__10 -> (t, Base.float) Fieldslib.Field.t -> 'acc__11) ->
  bits:('acc__11 -> (t, Base.float) Fieldslib.Field.t -> 'acc__12) ->
  qlen:('acc__12 -> (t, Base.int Base.option) Fieldslib.Field.t -> 'acc__13) ->
  tlen:('acc__13 -> (t, Base.int Base.option) Fieldslib.Field.t -> 'acc__14) ->
  'acc__14

val make_creator : 
  query:
    ((t, Base.string) Fieldslib.Field.t ->
      'acc__0 ->
      ('input__ -> Base.string) * 'acc__1) ->
  target:
    ((t, Base.string) Fieldslib.Field.t ->
      'acc__1 ->
      ('input__ -> Base.string) * 'acc__2) ->
  pident:
    ((t, Base.float) Fieldslib.Field.t ->
      'acc__2 ->
      ('input__ -> Base.float) * 'acc__3) ->
  alnlen:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__3 ->
      ('input__ -> Base.int) * 'acc__4) ->
  mismatch:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__4 ->
      ('input__ -> Base.int) * 'acc__5) ->
  gapopen:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__5 ->
      ('input__ -> Base.int) * 'acc__6) ->
  qstart:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__6 ->
      ('input__ -> Base.int) * 'acc__7) ->
  qend:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__7 ->
      ('input__ -> Base.int) * 'acc__8) ->
  tstart:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__8 ->
      ('input__ -> Base.int) * 'acc__9) ->
  tend:
    ((t, Base.int) Fieldslib.Field.t ->
      'acc__9 ->
      ('input__ -> Base.int) * 'acc__10) ->
  evalue:
    ((t, Base.float) Fieldslib.Field.t ->
      'acc__10 ->
      ('input__ -> Base.float) * 'acc__11) ->
  bits:
    ((t, Base.float) Fieldslib.Field.t ->
      'acc__11 ->
      ('input__ -> Base.float) * 'acc__12) ->
  qlen:
    ((t, Base.int Base.option) Fieldslib.Field.t ->
      'acc__12 ->
      ('input__ -> Base.int Base.option) * 'acc__13) ->
  tlen:
    ((t, Base.int Base.option) Fieldslib.Field.t ->
      'acc__13 ->
      ('input__ -> Base.int Base.option) * 'acc__14) ->
  'acc__0 ->
  ('input__ -> t) * 'acc__14

val create : 
  query:Base.string ->
  target:Base.string ->
  pident:Base.float ->
  alnlen:Base.int ->
  mismatch:Base.int ->
  gapopen:Base.int ->
  qstart:Base.int ->
  qend:Base.int ->
  tstart:Base.int ->
  tend:Base.int ->
  evalue:Base.float ->
  bits:Base.float ->
  qlen:Base.int Base.option ->
  tlen:Base.int Base.option ->
  t

val map : 
  query:((t, Base.string) Fieldslib.Field.t -> Base.string) ->
  target:((t, Base.string) Fieldslib.Field.t -> Base.string) ->
  pident:((t, Base.float) Fieldslib.Field.t -> Base.float) ->
  alnlen:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  mismatch:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  gapopen:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  qstart:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  qend:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  tstart:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  tend:((t, Base.int) Fieldslib.Field.t -> Base.int) ->
  evalue:((t, Base.float) Fieldslib.Field.t -> Base.float) ->
  bits:((t, Base.float) Fieldslib.Field.t -> Base.float) ->
  qlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.int Base.option) ->
  tlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.int Base.option) ->
  t

val iter : 
  query:((t, Base.string) Fieldslib.Field.t -> Base.unit) ->
  target:((t, Base.string) Fieldslib.Field.t -> Base.unit) ->
  pident:((t, Base.float) Fieldslib.Field.t -> Base.unit) ->
  alnlen:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  mismatch:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  gapopen:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  qstart:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  qend:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  tstart:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  tend:((t, Base.int) Fieldslib.Field.t -> Base.unit) ->
  evalue:((t, Base.float) Fieldslib.Field.t -> Base.unit) ->
  bits:((t, Base.float) Fieldslib.Field.t -> Base.unit) ->
  qlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.unit) ->
  tlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.unit) ->
  Base.unit

val for_all : 
  query:((t, Base.string) Fieldslib.Field.t -> Base.bool) ->
  target:((t, Base.string) Fieldslib.Field.t -> Base.bool) ->
  pident:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  alnlen:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  mismatch:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  gapopen:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  qstart:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  qend:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  tstart:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  tend:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  evalue:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  bits:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  qlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.bool) ->
  tlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.bool) ->
  Base.bool

val exists : 
  query:((t, Base.string) Fieldslib.Field.t -> Base.bool) ->
  target:((t, Base.string) Fieldslib.Field.t -> Base.bool) ->
  pident:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  alnlen:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  mismatch:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  gapopen:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  qstart:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  qend:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  tstart:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  tend:((t, Base.int) Fieldslib.Field.t -> Base.bool) ->
  evalue:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  bits:((t, Base.float) Fieldslib.Field.t -> Base.bool) ->
  qlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.bool) ->
  tlen:((t, Base.int Base.option) Fieldslib.Field.t -> Base.bool) ->
  Base.bool

val to_list : 
  query:((t, Base.string) Fieldslib.Field.t -> 'elem__) ->
  target:((t, Base.string) Fieldslib.Field.t -> 'elem__) ->
  pident:((t, Base.float) Fieldslib.Field.t -> 'elem__) ->
  alnlen:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  mismatch:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  gapopen:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  qstart:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  qend:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  tstart:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  tend:((t, Base.int) Fieldslib.Field.t -> 'elem__) ->
  evalue:((t, Base.float) Fieldslib.Field.t -> 'elem__) ->
  bits:((t, Base.float) Fieldslib.Field.t -> 'elem__) ->
  qlen:((t, Base.int Base.option) Fieldslib.Field.t -> 'elem__) ->
  tlen:((t, Base.int Base.option) Fieldslib.Field.t -> 'elem__) ->
  'elem__ Base.list

val map_poly : 
  ([< `Read | `Set_and_create ], t, 'x0) Fieldslib.Field.user ->
  'x0 Base.list

module Direct : sig ... end

package bio_io