package bistro

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package bistro
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type gsize = [
  1. | `hs
  2. | `mm
  3. | `ce
  4. | `dm
  5. | `gsize of int
]
type keep_dup = [
  1. | `all
  2. | `auto
  3. | `int of int
]
type _ format
class type output = object ... end
val sam : sam format
val bam : bam format
val run : ?control:'a Bistro.pworkflow list -> ?petdist:int -> ?gsize:gsize -> ?tsize:int -> ?bw:int -> ?pvalue:float -> ?mfold:(int * int) -> ?nolambda:bool -> ?slocal:int -> ?llocal:int -> ?on_auto:bool -> ?nomodel:bool -> ?shiftsize:int -> ?keep_dup:keep_dup -> ?to_large:bool -> ?wig:bool -> ?bdg:bool -> ?single_profile:bool -> ?space:int -> ?call_subpeaks:bool -> ?diag:bool -> ?fe_min:int -> ?fe_max:int -> ?fe_step:int -> 'a format -> 'a Bistro.pworkflow list -> output Bistro.pworkflow
class type peaks_xls = object ... end
class type narrow_peaks = object ... end
class type peak_summits = object ... end