package bistro

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package bistro
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val pileup : ?extsize:int -> ?both_direction:bool -> bam Bistro.pworkflow -> Ucsc_gb.bedGraph Bistro.pworkflow
type gsize = [
  1. | `hs
  2. | `mm
  3. | `ce
  4. | `dm
  5. | `gsize of int
]
type keep_dup = [
  1. | `all
  2. | `auto
  3. | `int of int
]
type _ format
val sam : sam format
val bam : bam format
class type output = object ... end
class type narrow_output = object ... end
class type broad_output = object ... end
val callpeak : ?pvalue:float -> ?qvalue:float -> ?gsize:gsize -> ?call_summits:bool -> ?fix_bimodal:bool -> ?mfold:(int * int) -> ?extsize:int -> ?nomodel:bool -> ?bdg:bool -> ?control:'a Bistro.pworkflow list -> ?keep_dup:keep_dup -> 'a format -> 'a Bistro.pworkflow list -> narrow_output Bistro.pworkflow
class type peaks_xls = object ... end
class type narrow_peaks = object ... end
class type peak_summits = object ... end
val callpeak_broad : ?pvalue:float -> ?qvalue:float -> ?gsize:gsize -> ?call_summits:bool -> ?fix_bimodal:bool -> ?mfold:(int * int) -> ?extsize:int -> ?nomodel:bool -> ?bdg:bool -> ?control:'a Bistro.pworkflow list -> ?keep_dup:keep_dup -> 'a format -> 'a Bistro.pworkflow list -> broad_output Bistro.pworkflow
class type broad_peaks = object ... end