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in-package search v0.1.0
package bistro
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bistro.bioinfo
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bistro.ppx
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bistro.utils
Legend:
Library
Module
Module type
Parameter
Class
Class type
Library
Module
Module type
Parameter
Class
Class type
val env : Bistro.docker_imagemodule Cmd : sig ... endval slop :
?strand:bool ->
?header:bool ->
mode:
[ `both of int
| `left of int
| `right of int
| `both_pct of float
| `left_pct of float
| `right_pct of float ] ->
'a input ->
'a Bistro.Std.workflow ->
Ucsc_gb.chrom_sizes Bistro.Std.workflow ->
'a Bistro.Std.workflowval intersect :
?ubam:bool ->
?wa:bool ->
?wb:bool ->
?loj:bool ->
?wo:bool ->
?wao:bool ->
?u:bool ->
?c:bool ->
?v:bool ->
?f:float ->
?_F:float ->
?r:bool ->
?e:bool ->
?s:bool ->
?_S:bool ->
?split:bool ->
?sorted:bool ->
?g:Ucsc_gb.chrom_sizes Bistro.Std.workflow ->
?header:bool ->
?filenames:bool ->
?sortout:bool ->
'a input ->
'a Bistro.Std.workflow ->
Defs.bed3 Bistro.Std.workflow list ->
'a Bistro.Std.workflowval bamtobed :
?bed12:bool ->
?split:bool ->
?splitD:bool ->
?ed:bool ->
?tag:bool ->
?cigar:bool ->
Defs.bam Bistro.Std.workflow ->
Defs.bed6 Bistro.Std.workflow