package bistro-bio

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val fastq_screen : ?bowtie2_opts:string -> ?filter: [ `Not_map | `Uniquely | `Multi_maps | `Maps | `Not_map_or_Uniquely | `Not_map_or_Multi_maps | `Ignore ] list -> ?illumina:bool -> ?nohits:bool -> ?pass:int -> ?subset:int -> ?tag:bool -> ?threads:int -> ?top:[ `top1 of int | `top2 of int * int ] -> ?lightweight:bool -> Fastq_sample.t -> (string * Formats.fasta Bistro.file) list -> [ `fastq_screen ] Bistro.directory
val html_report : [ `fastq_screen ] Bistro.directory -> Bistro.html Bistro.file
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