package bistro-bio

  1. Overview
  2. Docs
val meme : ?nmotifs:int -> ?minw:int -> ?maxw:int -> ?revcomp:bool -> ?maxsize:int -> ?alphabet:[ `dna | `rna | `protein ] -> Formats.fasta Bistro.file -> [ `meme ] Bistro.directory
val meme_chip : ?meme_nmotifs:int -> ?meme_minw:int -> ?meme_maxw:int -> Formats.fasta Bistro.file -> [ `meme_chip ] Bistro.directory
val fimo : ?alpha:float -> ?bgfile:Bistro.text Bistro.file -> ?max_stored_scores:int -> ?max_strand:bool -> ?motif:string -> ?motif_pseudo:float -> ?no_qvalue:bool -> ?norc:bool -> ?parse_genomic_coord:bool -> ?prior_dist:Bistro.text Bistro.file -> ?psp:Bistro.text Bistro.file -> ?qv_thresh:bool -> ?thresh:float -> [ `meme ] Bistro.directory -> Formats.fasta Bistro.file -> [ `fimo ] Bistro.directory

http://meme-suite.org/doc/fimo.html?man_type=web

OCaml

Innovation. Community. Security.